请输入您要查询的百科知识:

 

词条 NeXtProt
释义

  1. References

  2. External links

{{coi|date=July 2018}}{{primary|date=July 2018}}{{notability|date=July 2018}}{{infobox biodatabase
|title = neXtProt
|logo =
|description = neXtProt: exploring the universe of human proteins
|scope = Protein annotation
|organism = Human
|center = Swiss Institute of Bioinformatics
|laboratory = CALIPHO
|author =
|citation = Gaudet, et al. (2016)[1]
|pmid =
|released =
|standard =
|format =
|url = {{URL|www.nextprot.org}}
|download =
|webservice =
|sql =
|sparql =
|webapp = Search, BLAST, SNORQL
|standalone =
|news =
|license = Creative Commons Attribution 4.0
|versioning = Yes
|frequency = Data: 3 times per year
|curation = Yes - manual and automatic
|bookmark = Yes - individual protein entries views and searches
|version =
}}

neXtProt is an on-line knowledge platform on human proteins.

It strives to be a comprehensive resource that provides a variety of

types of information on human proteins, such as their function,

subcellular location, expression, interactions and role in diseases.

The major part of the information in neXtProt

[2]

is obtained from the UniProt Swiss-Prot database but it is complemented by data originating from high-throughput studies with an emphasis on proteomics. neXtProt offers also an advanced search capacity based on the SPARQL technology as well as an API that allows to programatically extract the data stored in the resource. It is developed by the CALIPHO group[3] directed by Amos Bairoch and Lydie Lane of the Swiss Institute of Bioinformatics (SIB).

References

1. ^{{cite journal|last1=Gaudet|first1=P|last2=Michel|first2=PA|last3=Zahn-Zabal|first3=M|last4=Britan|first4=A|last5=Cusin|first5=I|last6=Domagalski|first6=M|last7=Duek|first7=PD|last8=Gateau|first8=A|last9=Gleizes|first9=A|last10=Hinard|first10=V|last11=de Laval|first11=VR|last12=Lin|first12=J|last13=Nikitin|first13=F|last14=Schaeffer|first14=M|last15=Teixeira|first15=D|last16=Lane|first16=L|last17=Bairoch|first17=A|title=The neXtProt knowledgebase on human proteins: 2017 update.|journal=Nucleic Acids Research|date=29 November 2016|pmid=27899619|doi=10.1093/nar/gkw1062|volume=45|pmc=5210547|pages=D177-D182}}
2. ^{{cite journal |author=Lane Lydie|title=neXtProt: a knowledge platform for human proteins |journal=Nucleic Acids Research |volume=40 |pages=D76–D83 |year=2012 |pmid=22139911 |doi=10.1093/nar/gkr1179 |issue=Database issue |pmc=3245017}}
3. ^CALIPHO group, on the web site of the SIB

External links

  • [https://www.nextprot.org/ neXtProt] - Exploring the universe of human proteins
  • [https://www.uniprot.org/ UniProt] - The Universal protein resource
  • [https://www.sib.swiss/ SIB] - The Swiss Institute of Bioinformatics
  • [https://github.com/calipho-sib GitHub directory for neXtProt code]
{{Biology-footer}}

4 : Molecular biology|Biological databases|Human biology|Human proteins

随便看

 

开放百科全书收录14589846条英语、德语、日语等多语种百科知识,基本涵盖了大多数领域的百科知识,是一部内容自由、开放的电子版国际百科全书。

 

Copyright © 2023 OENC.NET All Rights Reserved
京ICP备2021023879号 更新时间:2024/9/22 21:25:34