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词条 Slippery sequence
释义

  1. See also

  2. References

  3. External links

A slippery sequence is a small section of codon nucleotide sequences (usually UUUAAAC) that controls the rate of ribosomal frameshifting. A slippery sequence causes a faster ribosomal transfer which in turn can cause the reading ribosome to "slip." This allows a tRNA to shift by 1 base after it has paired with its anticodon, changing the reading frame.[1][2][3][4][5]

See also

  • Nucleic acid tertiary structure
  • Open reading frame
  • Ribosomal frameshifting
  • Translational frameshift
  • Transposable element

References

1. ^Green L, Kim CH, Bustamante C, Tinoco I Jr. "Characterization of the Mechanical Unfolding of RNA Pseudoknots." J Mol Biol. 26 May 2007
2. ^Chien-Hung Yu, Mathieu H. M. Noteborn and René C. L. Olsthoorn.Stimulation of ribosomal frameshifting by antisense LNA. Nucl.Acids Res (2010) 38 (22):8277-8238
3. ^{{cite web |url=http://www.path.cam.ac.uk/research/investigators/brierley/research.html |title=Archived copy |accessdate=2013-07-28 |deadurl=yes |archiveurl=https://web.archive.org/web/20131002121121/http://www.path.cam.ac.uk/research/investigators/brierley/research.html |archivedate=2013-10-02 |df= }}
4. ^{{cite web|url=http://molecularstudy.blogspot.com/2012/10/frameshifting-occurs-at-slippery.html |title=Molecular Biology: Frameshifting occurs at slippery sequences |publisher=Molecularstudy.blogspot.com |date= |accessdate=2013-07-28}}
5. ^{{cite journal|title=How translational accuracy influences reading frame maintenance|first1=P. J.|last1=Farabaugh|first2=G. R.|last2=Björk|date=15 March 1999|publisher=|journal=EMBO J.|volume=18|issue=6|pages=1427–1434|via=PubMed|doi=10.1093/emboj/18.6.1427|pmid=10075915|pmc=1171232}}

External links

  • Pseudobase
  • Recode
  • {{MeshName|Frameshifting,+Ribosomal}}
  • Wise2 - aligns a protein against a DNA sequence allowing frameshifts and introns
  • FastY - compare a DNA sequence to a protein sequence database, allowing gaps and frameshifts
  • Path - tool that compares two frameshift proteins (back-translation principle)
  • Recode2 - Database of recoded genes, including those that require programmed Translational frameshift.
  • {{Rfam|id=RF00507|name=Coronavirus frameshifting stimulation element}}
{{Biomolecular structure}}{{molecular-cell-biology-stub}}

4 : RNA|Gene expression|Cis-regulatory RNA elements|Coronaviridae

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