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词条 Oligotyping (taxonomy)
释义

  1. Classifying bacteria

  2. See also

  3. References

{{Use dmy dates|date=April 2011}}{{For|another sequencing process of same name|Oligotyping (sequencing)}}

Oligotyping is a diagnostic or molecular biological method for classification of organisms by short intervals of primary DNA sequence.

Oligotyping 'systems' are sets of recognized target sequences which identify the members of the categories within the classification. The classification may be for the purpose of primary biological taxonomy, or for a functional classification.

Classifying bacteria

Oligotyping has been used for classifying bacteria,[1] identifying bacterial antibiotic resistance genes,[2] identifying genetic factors in human infectious disease,[3] and performing histocompatibility tests for human blood or bone marrow donors/recipients .

See also

  • Oligotyping (sequencing)
  • {{C|Taxonomy (biology)}}
  • {{C|Bacterial taxonomy}}

References

1. ^{{Cite journal|last=Roring|first=S|last2=Brittain|first2=D|last3=Bunschoten|first3=A. E|last4=Hughes|first4=M. S|last5=Skuce|first5=R. A|last6=van Embden|first6=J. D. A|last7=Neill|first7=S. D|date=1998-03-15|title=Spacer oligotyping of Mycobacterium bovis isolates compared to typing by restriction fragment length polymorphism using PGRS, DR and IS6110 probes|url=http://www.sciencedirect.com/science/article/pii/S0378113598001783|journal=Veterinary Microbiology|volume=61|issue=1–2|pages=111–120|doi=10.1016/S0378-1135(98)00178-3}}
2. ^{{Cite journal|last=Mabilat|first=C.|last2=Courvalin|first2=P.|date=1990-11-01|title=Development of "oligotyping" for characterization and molecular epidemiology of TEM beta-lactamases in members of the family Enterobacteriaceae.|url=http://aac.asm.org/content/34/11/2210|journal=Antimicrobial Agents and Chemotherapy|language=en|volume=34|issue=11|pages=2210–2216|doi=10.1128/AAC.34.11.2210|issn=0066-4804|pmid=2073111|pmc=172024}}
3. ^{{Cite journal|last=Rani|first=Rajni|last2=Fernandez-Vina|first2=M. A.|last3=Zaheer|first3=S. A.|last4=Beena|first4=K. R.|last5=Stastny|first5=Peter|date=1993-07-01|title=Study of HLA class II alleles by PCR oligotyping in leprosy patients from North India|journal=Tissue Antigens|language=en|volume=42|issue=1|pages=133–137|doi=10.1111/j.1399-0039.1993.tb02179.x|issn=1399-0039|pmid=8284786}}
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5 : DNA sequencing|Molecular biology techniques|Taxonomy (biology)|Bacterial taxonomy|1998 in biotechnology

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