“MAVID”的意思、由来-开放百科全书

词条

MAVID

释义

Input/Output
References
External links

{{Notability|Products|date=November 2008}}{{Infobox Software|name=MAVID|developer=Nicolas Bray (UC Berkeley), Lior Pachter (UC Berkeley)|latest_release_version=2.0.4|operating_system=UNIX, Linux, Mac|genre=Bioinformatics tool|licence=Open source|website=MAVID download}}

MAVID is a multiple sequence alignment program suitable for the alignment of large numbers of DNA sequences. The sequences can be small mitochondrial genomes or large genomic regions up to megabases long. The latest version is 2.0.4.

The program can be used through the [https://web.archive.org/web/20061011195311/http://baboon.math.berkeley.edu/mavid/ MAVID web server] or as a standalone program which can be installed with the source code.

Input/Output

This program accepts sequences in FASTA format.

The output format includes: FASTA format, Clustal, PHYLIP.

References

*{{citation|first1=N.|last1=Bray|author2-link=Lior Pachter|first2=L.|last2=Pachter|title=MAVID: Constrained ancestral alignment of multiple sequences|journal=Genome Research|volume=14|year=2004|pages=693–699|doi=10.1101/gr.1960404|pmid=15060012|pmc=383315|arxiv=q-bio/0311018}}.

External links

[https://web.archive.org/web/20061011195311/http://baboon.math.berkeley.edu/mavid/ MAVID web server]

2 : Bioinformatics software|Computational phylogenetics

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