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词条 Small nucleolar RNA SNORD101
释义

  1. References

  2. External links

{{Infobox rfam
| Name = Small nucleolar RNA SNORD101
| image = RF00186.jpg
| width =
| caption = Predicted secondary structure and sequence conservation of SNORD101
| Symbol = SNORD101
| AltSymbols = U101
| Rfam = RF00186
| miRBase =
| miRBase_family =
| RNA_type = Gene; snRNA; snoRNA; CD-box
| Tax_domain = Eukaryota
| GO = {{GO|0006396}} {{GO|0005730}}
| SO = {{SO|0000593}}
| CAS_number =
| EntrezGene =
| HGNCid =
| OMIM =
| PDB =
| RefSeq =
| Chromosome =
| Arm =
| Band =
| LocusSupplementaryData =
}}

snoRNA U101 (also known as SNORD101) is a non-coding RNA (ncRNA) molecule which functions in the modification of other small nuclear RNAs (snRNAs). This type of modifying RNA is usually located in the nucleolus of the eukaryotic cell which is a major site of snRNA biogenesis. It is known as a small nucleolar RNA (snoRNA) and also often referred to as a guide RNA.

snoRNA U101 belongs to the C/D box class of snoRNAs which contain the conserved sequence motifs known as the C box (UGAUGA) and the D box (CUGA). Most of the members of the box C/D family function in directing site-specific 2'-O-methylation of substrate RNAs.[1]

U101 was identified by computational screening of the introns of ribosomal protein genes for conserved C/D box sequence motifs and expression experimentally verified by northern blotting.[2] snoRNA U101 resides in intron 3 of the ribosomal protein S12. U101 shares the same host gene with C/D box snoRNA HBII-429, and the H/ACA box snoRNA ACA33.[3]

There is currently no predicted methylation target for U101.[2][3]

References

1. ^{{Cite journal | last1 = Galardi | first1 = S.| last2 = Fatica | first2 = A.| last3 = Bachi | first3 = A.| last4 = Scaloni | first4 = A.| last5 = Presutti | first5 = C.| last6 = Bozzoni | first6 = I.| doi = 10.1128/MCB.22.19.6663-6668.2002 | title = Purified Box C/D snoRNPs Are Able to Reproduce Site-Specific 2'-O-Methylation of Target RNA in Vitro | journal = Molecular and Cellular Biology| volume = 22 | issue = 19 | pages = 6663–6668 | date=October 2002 | pmid = 12215523| pmc = 134041}}
2. ^{{cite journal |vauthors=Vitali P, Royo H, Seitz H, Bachellerie JP, Hüttenhofer A, Cavaillé J | title = Identification of 13 novel human modification guide RNAs | journal = Nucleic Acids Res. | volume = 31 | issue = 22 | pages = 6543–51 | year = 2003 | pmid = 14602913 | doi = 10.1093/nar/gkg849| pmc = 275545 }}
3. ^{{Cite journal | last1 = Lestrade | first1 = Laurent | last2 = Weber | first2 = Michel J. | title = snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs | doi = 10.1093/nar/gkj002 | journal = Nucleic Acids Research | volume = 34 | issue = Supplement 1: Database Issue | pages = D158–D162 | year = 2006 | pmc = 1347365 | pmid = 16381836 | citeseerx = 10.1.1.105.7552}}

External links

  • {{Rfam|id=RF00186|name=Small nucleolar RNA SNORD101}}
  • {{snoRNABase|id=U101|name=SNORD101}}
{{Small nucleolar RNA}}{{molecular-cell-biology-stub}}

1 : Small nuclear RNA

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