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词条 Small nucleolar RNA SNORD102
释义

  1. References

  2. External links

{{Infobox rfam
| Name = Small nucleolar RNA SNORD102
| image = RF00187.jpg
| width =
| caption = Predicted secondary structure and sequence conservation of SNORD102
| Symbol = SNORD102
| AltSymbols = U102
| Rfam = RF00187
| miRBase =
| miRBase_family =
| RNA_type = Gene; snRNA; snoRNA; CD-box
| Tax_domain = Eukaryota
| GO = {{GO|0006396}} {{GO|0005730}}
| SO = {{SO|0000593}}
| CAS_number =
| EntrezGene =
| HGNCid =
| OMIM =
| PDB =
| RefSeq =
| Chromosome =
| Arm =
| Band =
| LocusSupplementaryData =
}}

snoRNA U102 (also known as SNORD102) is a non-coding RNA (ncRNA) molecule which functions in the modification of other small nuclear RNAs (snRNAs). This type of modifying RNA is usually located in the nucleolus of the eukaryotic cell which is a major site of snRNA biogenesis. It is known as a small nucleolar RNA (snoRNA) and also often referred to as a guide RNA.

snoRNA U102 belongs to the C/D box class of snoRNAs which contain the conserved sequence motifs known as the C box (UGAUGA) and the D box (CUGA). Most of the members of the box C/D family function in directing site-specific 2'-O-methylation of substrate RNAs.[1]

U102 was identified by computational screening of the introns of ribosomal protein genes for conserved C/D box sequence motifs and expression experimentally verified by northern blotting.[2] It is found within intron 2 of the L21 ribosomal protein gene. The H/ACA box snoRNA ACA27 is found in the same host gene within a different intron.[3]

U102 is predicted to guide the 2'O-ribose methylation of 28S ribosomal RNA (rRNA) residue G4020.[3]

References

1. ^{{Cite journal | last1 = Galardi | first1 = S.| last2 = Fatica | first2 = A.| last3 = Bachi | first3 = A.| last4 = Scaloni | first4 = A.| last5 = Presutti | first5 = C.| last6 = Bozzoni | first6 = I.| doi = 10.1128/MCB.22.19.6663-6668.2002 | title = Purified Box C/D snoRNPs Are Able to Reproduce Site-Specific 2'-O-Methylation of Target RNA in Vitro | journal = Molecular and Cellular Biology| volume = 22 | issue = 19 | pages = 6663–6668 | date=October 2002 | pmid = 12215523| pmc = 134041}}
2. ^{{cite journal |vauthors=Vitali P, Royo H, Seitz H, Bachellerie JP, Hüttenhofer A, Cavaillé J | title = Identification of 13 novel human modification guide RNAs | journal = Nucleic Acids Res. | volume = 31 | issue = 22 | pages = 6543–51 | year = 2003 | pmid = 14602913 | doi = 10.1093/nar/gkg849| pmc = 275545 }}
3. ^{{Cite journal | last1 = Lestrade | first1 = Laurent | last2 = Weber | first2 = Michel J. | title = snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs | doi = 10.1093/nar/gkj002 | journal = Nucleic Acids Research | volume = 34 | issue = Supplement 1: Database Issue | pages = D158–D162 | year = 2006 | pmc = 1347365 | pmid = 16381836 | citeseerx=10.1.1.105.7552}}

External links

  • {{Rfam|id=RF00187|name=Small nucleolar RNA SNORD102}}
  • {{snoRNABase|id=U102|name=SNORD102}}
{{Small nucleolar RNA}}{{molecular-cell-biology-stub}}

1 : Small nuclear RNA

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