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词条 U4atac minor spliceosomal RNA
释义

  1. Disease

  2. References

  3. External links

{{Infobox rfam
| Name = U4atac minor spliceosomal RNA
| image = RF00618.jpg
| width =
| caption = Predicted secondary structure and sequence conservation of U4atac
| Symbol = U4atac
| AltSymbols =
| Rfam = RF00618
| miRBase =
| miRBase_family =
| RNA_type = Gene; snRNA; splicing
| Tax_domain = Eukaryota
| GO = {{GO|0000355}} {{GO|0000369}} {{GO|0030624}} {{GO|0030627}} {{GO|0005690}}
| SO = {{SO|0000274}}
| CAS_number =
| EntrezGene =
| HGNCid =
| OMIM =
| PDB =
| RefSeq =
| Chromosome =
| Arm =
| Band =
| LocusSupplementaryData =
}}U4atac minor spliceosomal RNA is a ncRNA which is an essential component of the minor U12-type spliceosome complex. The U12-type spliceosome is required for removal of the rarer class of eukaryotic introns (AT-AC, U12-type).[1]

U4atac snRNA is proposed to form a base-paired complex with another spliceosomal RNA U6atac via two stem loop regions. These interacting stem loops have been shown to be required for in vivo splicing.[2] U4atac also contains an 3' Sm protein binding site which has been shown to be essential for splicing activity.[2] U4atac is the functional analog of U4 spliceosomal RNA in the major U2-type spliceosomal complex.[2]

The Drosophila U4atac snRNA has an additional predicted 3' stem loop terminal to the Sm binding site.[3]

Disease

It has been shown that mutations in the U4atac snRNA can cause microcephalic osteodysplastic primordial dwarfism type I (MOPD I), also called Taybi-Linder syndrome (TALS). MOPD I is a developmental disorder that is associated with brain and skeletal abnormalities. It has been shown that the mutations cause defective U12 splicing.[4][5]

References

1. ^{{cite journal |vauthors= Lorkovic ZJ, Lehner R, Forstner C, Barta A |title= Evolutionary conservation of minor U12-type spliceosome between plants and humans |journal= RNA |volume= 11 |issue= 7|pages= 1095–1107 |year= 2005 |pmid=15987817 |doi= 10.1261/rna.2440305 |pmc= 1370794}}
2. ^{{cite journal |vauthors= Shukla GC, Cole AJ, Dietrich RC, Padgett RA |title= Domains of human U4atac snRNA required for U12-dependent splicing in vivo |journal= Nucleic Acids Res |volume= 30 |issue= 21|pages= 4650–4657 |year= 2002 |pmid=12409455 |doi= 10.1093/nar/gkf609 |pmc= 135832}}
3. ^{{cite journal |vauthors= Padgett RA, Shukla GC |title= A revised model for U4atac/U6atac snRNA base pairing |journal= RNA |volume= 8 |issue= 2|pages= 125–128 |year= 2002 |pmid=11911359 |doi= 10.1017/S1355838202017156 |pmc= 1370236}}
4. ^{{cite journal |author= He, H|title=Mutations in U4atac snRNA, a Component of the Minor Spliceosome, in the Developmental Disorder MOPD I |journal=Science |volume=332 |issue=6026 |pages=238–240 |year=2011 |pmid=21474760 |doi=10.1126/science.1200587 |url=http://www.sciencemag.org/content/332/6026/238.short |pmc=3380448|display-authors=etal}}
5. ^{{cite journal |author= Edery, P|title=Association of TALS developmental disorder with defect in minor splicing component U4atac snRNA |journal=Science |volume=332 |issue=6026 |pages=240–243 |year=2011 |pmid=21474761 |doi=10.1126/science.1202205 |url=http://www.sciencemag.org/content/332/6026/240.short|display-authors=etal}}

External links

  • {{Rfam|id=RF00618|name=U4atac minor spliceosomal RNA}}
{{DEFAULTSORT:U4atac Minor Spliceosomal Rna}}{{molecular-cell-biology-stub}}

3 : Non-coding RNA|Spliceosome|RNA splicing

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