| Week | Artist | Title |
|---|
| 3 January 1969 | Summer break - no chart}} | Summer break - no chart}} |
| 10 January 1969 | Summer break - no chart}} | Summer break - no chart}} |
| 17 January 1969 | Diana Ross & the Supremes | "Love Child" |
| 24 January 1969 |
| 31 January 1969 | The Scaffold | "Lily The Pink" |
| 7 February 1969 | Lulu | "I'm a Tiger" |
| 14 February 1969 | Barry Ryan | "Eloise" |
| 21 February 1969 | Dave Dee, Dozy, Beaky, Mick & Tich | "The Wreck of the 'Antoinette'" |
| 28 February 1969 | Marmalade | "Ob-La-Di, Ob-La-Da" |
| 7 March 1969 | The Marbles | "Only One Woman" |
| 14 March 1969 | The Beatles | "Ob-La-Di, Ob-La-Da" |
| 21 March 1969 | Bee Gees | "I Started a Joke" |
| 28 March 1969 |
| 3 April 1969 | Manfred Mann | "Fox on the Run" |
| 10 April 1969 | Rebels {{flagicon|New Zealand}} | "My Son John |
| 17 April 1969 |
| 24 April 1969 | New Zealand}} | "M'Lady" |
| 1 May 1969 | Tommy James & the Shondells | "Crimson & Clover" |
| 8 May 1969 |
| 15 May 1969 |
| 22 May 1969 | Peter Sarstedt | "Where Do You Go To (My Lovely)?" |
| 29 May 1969 |
| 5 June 1969 | The Beatles | "Get Back" |
| 12 June 1969 |
| 20 June 1969 | The Cowsills | "Hair" |
| 27 June 1969 |
| 4 July 1969 |
| 11 July 1969 |
| 18 July 1969 | Elvis Presley | "In the Ghetto" |
| 25 July 1969 |
| 1 August 1969 |
| 8 August 1969 |
| 15 August 1969 | Creedence Clearwater Revival | "Bad Moon Rising" |
| 22 August 1969 | Tommy Roe | "Heather Honey" |
| 29 August 1969 | Creedence Clearwater Revival | "Bad Moon Rising" |
| 5 September 1969 | Zager & Evans | "In The Year 2525" |
| 12 September 1969 |
| 19 September 1969 | Rolling Stones | "Honky Tonk Women" |
| 26 September 1969 | Shane {{flagicon|New Zealand}} | "Saint Paul" |
| 3 October 1969 |
| 10 October 1969 |
| 17 October 1969 |
| 24 October 1969 |
| 31 October 1969 |
| 7 November 1969 | Robin Gibb | "Saved by the Bell" |
| 14 November 1969 | New Zealand}} | "Rain & Tears" |
| 21 November 1969 | The Beatles | "Something" |
| 28 November 1969 |
| 5 December 1969 | Bee Gees | "Don't Forget to Remember" |
| 12 December 1969 |
| 19 December 1969 | Elvis Presley | "Suspicious Minds" |
| 26 December 1969 | The Beatles | "Come Together" |
|