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词条 Nitrospirae
释义

  1. Phylogeny

  2. Taxonomy

  3. See also

  4. References

  5. Further reading

  6. External links

{{Taxobox
| name = Nitrospirae
| image_caption =
| domain = Bacteria
| phylum = Nitrospirae
| phylum_authority = Garrity & Holt 2001
| classis = Nitrospiria
| ordo = Nitrospirales
| familia = Nitrospiraceae
| subdivision_ranks = Genera
| subdivision =
  • Candidatus Magnetobacterium Spring et al. 1993
  • Candidatus Magnetoovum Lefevre et al. 2011
  • Leptospirillum (ex Markosyan 1972) Hippe 2000
  • Nitrospira Watson et al. 1986

| synonyms =
  • Nitrospiraeota Oren et al. 2015

}}Nitrospirae is a phylum of bacteria. It contains only one class, Nitrospira, which itself contains one order (Nitrospirales) and one family (Nitrospiraceae). It includes multiple genera, such as Nitrospira, the largest. The first member of this phylum, Nitrospira marina, was discovered in 1985.[1] The second member, Nitrospira moscoviensis, was discovered in 1995.[2][3]

Phylogeny

{{see also|Bacterial taxonomy}}

The phylogeny based on the work of the All-Species Living Tree Project.[3]

{{Clade | style=font-size:100%;line-height:80%
|1={{clade
|label1=Leptospirillum
|1={{clade
|1=L. ferriphilum Coram and Rawlings 2002
|2=L. ferrooxidans (ex Markosyan 1972) Hippe 2000 (type sp.)
|label2=Thermodesulfovibrio
|2={{clade
|1=T. hydrogeniphilus Haouari et al. 2009
|2={{clade
|1=T. aggregans Sekiguchi et al. 2008
|2={{clade
|1=T. thiophilus Sekiguchi et al. 2008
|2={{clade
|1=T. islandicus Sonne-Hansen and Ahring 2000
|2=T. yellowstonii Henry et al. 1994 (type sp.)
           }}         }}       }}     }}   }}

}}

Taxonomy

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LSPN)[4] and the National Center for Biotechnology Information (NCBI).[5]

  • Phylum "Nitrospirae" Garrity & Holt 2001 [Nitrospiraeota Oren et al. 2015 ]
    • Class Nitrospiria Oren et al. 2015 ["Nitrospirae"]
    • Order "Nitrospirales"
    • Family "Nitrospiraceae"
    • Genus "Candidatus Magnetobacterium" Spring et al. 1993
    • Species "Ca. M. bavaricum" Spring et al. 1993
    • Species "Ca. M. casensis" Lin et al. 2014
    • Genus "Candidatus Magnetoovum" Lefevre et al. 2011
    • Species "Ca. M. mohavensis" Lefevre et al. 2011
    • Species "Ca. M. chiemensis" Kolinko 2014
    • Genus Leptospirillum (ex Markosyan 1972) Hippe 2000
    • Species L. ferrodiazotrophum ♠ Tyson et al. 2005
    • Species L. rubarum ♠ Aliaga Goltsman et al. 2009
    • Species L. thermoferrooxidans Hippe 2000
    • Species L. ferriphilum Coram and Rawlings 2002
    • Species L. ferrooxidans (ex Markosyan 1972) Hippe 2000 (type sp.)
    • Genus Nitrospira Watson et al. 1986
    • Species "Ca. N. bockiana" ♠ Lebedeva et al. 2008
    • Species "Ca. N. inopinata" ♠ Daims et al. 2015
    • Species "Ca. N. nitrificans" ♠ van Kessel et al. 2015
    • Species "Ca. N. nitrosa" ♠ van Kessel et al. 2015
    • Species "Ca. N. salsa" ♠ Haaijer et al. 2013
    • Species N. calida ♠ Lebedeva et al. 2011
    • Species N. defluvii ♠ Nowka et al. 2015 ["Candidatus Nitrospira defluvii" Spieck et al. 2006]
    • Species N. japonica ♠ Ushiki et al. 2013
    • Species N. lenta Nowka et al. 2015
    • Species N. marina Watson et al. 1986 (type sp.)
    • Species N. moscoviensis Ehrich et al. 1995
    • Genus Thermodesulfovibrio Henry et al. 1994 emend. Sekiguchi et al. 2008
    • Species T. aggregans Sekiguchi et al. 2008
    • Species T. hydrogeniphilus Haouari et al. 2009
    • Species T. islandicus Sonne-Hansen and Ahring 2000
    • Species T. thiophilus Sekiguchi et al. 2008
    • Species T. yellowstonii Henry et al. 1994 (type sp.)

Notes:

♠ Strain found at the National Center for Biotechnology Information (NCBI) but not listed in the List of Prokaryotic names with Standing in Nomenclature (LPSN)

See also

  • Nitrospira
  • Nitrosomonas
  • Nitrobacteraceae
  • Nitrobacter
  • Nitrogen cycle
  • Nitrite
  • Nitrate
  • List of bacterial orders

References

1. ^{{cite journal |author1=Stanley W. Watson |author2=Eberhard Bock |author3=Frederica W. Valois |author4=John B. Waterbury |author5=Ursula Schlosser | title = Nitrospira marina gen. nov. sp. nov.: a chemolithotrophic nitrite-oxidizing bacterium. | journal = Arch Microbiol | volume = 144 | issue = 1 | pages = 1–7|doi = 10.1007/BF00454947 |year=1986 }}
2. ^{{cite journal |vauthors=Ehrich S, Behrens D, Lebedeva E, Ludwig W, Bock E | title = A new obligately chemolithoautotrophic, nitrite-oxidizing bacterium, Nitrospira moscoviensis sp. nov. and its phylogenetic relationship. | journal = Arch Microbiol | volume = 164 | issue = 1 | pages = 16–23 | year = 1995 | pmid = 7646315 | doi = 10.1007/BF02568729}}
3. ^{{cite web | url=http://www.arb-silva.de/fileadmin/silva_databases/living_tree/LTP_release_123/LTPs123_SSU_tree.pdf | title=16S rRNA-based LTP release 123 (full tree) | publisher=Silva Comprehensive Ribosomal RNA Database | accessdate=2016-03-20}}
4. ^{{cite web |author = J.P. Euzéby | url=http://www.bacterio.net/-classifphyla.html#Nitrospirae |title=Nitrospirae |publisher=List of Prokaryotic names with Standing in Nomenclature (LPSN)| accessdate=2016-03-20}}
5. ^1 {{cite web |author = Sayers| url=https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=40117&lvl=6&lin=f&keep=1&srchmode=1&unlock |title=Nitrospirae |publisher=National Center for Biotechnology Information (NCBI) taxonomy database |accessdate=2016-03-20 |display-authors=etal}}

Further reading

  • {{cite journal|last1=Lefevre|first1=Christopher T.|last2=Frankel|first2=Richard B.|last3=Abreu|first3=Fernanda|last4=Lins|first4=Ulysses|last5=Bazylinski|first5=Dennis A.|title=Culture-independent characterization of a novel, uncultivated magnetotactic member of the Nitrospirae phylum|journal=Environmental Microbiology|date=26 Oct 2010|volume=13|issue=2|pages=538–549|doi=10.1111/j.1462-2920.2010.02361.x|pmid=20977572}}

External links

  • Leptospirillum sp.
{{Bacteria classification|state=expanded}}{{Life on Earth}}{{Taxonbar|from=Q20751938}}{{bacteria-stub}}

2 : Bacteria phyla|Nitrospirae
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