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词条 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase
释义

  1. Nomenclature

  2. Structural studies

  3. References

  4. Further reading

{{duplication|dupe=PNGase F|date=March 2016}}{{enzyme
| Name = peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase
| EC_number = 3.5.1.52
| CAS_number = 83534-39-8
| IUBMB_EC_number = 3/5/1/52
| GO_code = 0000224
| image = Protein_NGLY1_PDB_2ccq.png
| width =
| caption = Rendering based on {{PDB|2ccq}}
}}

In enzymology, a peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase ({{EC number|3.5.1.52}}) is an enzyme that catalyzes a chemical reaction that cleaves a N4-(acetyl-beta-D-glucosaminyl)asparagine residue in which the glucosamine residue may be further glycosylated, to yield a (substituted) N-acetyl-beta-D-glucosaminylamine and a peptide containing an aspartate residue. This enzyme belongs to the family of hydrolases, specifically those acting on carbon-nitrogen bonds other than peptide bonds in linear amides.

The NGLY1 gene encodes the ortholog of this enzyme in humans.

Nomenclature

The systematic name of this enzyme class is N-linked-glycopeptide-(N-acetyl-beta-D-glucosaminyl)-L-asparagine amidohydrolase. Other names in common use include:

  • glycopeptide N-glycosidase,
  • glycopeptidase,
  • N-oligosaccharide glycopeptidase,
  • N-glycanase,
  • Jack-bean glycopeptidase,
  • PNGase A,[1] and
  • PNGase F

Structural studies

The enzyme uses a catalytic triad of cysteine-histidine-aspartate in its active site for hydrolysis by covalent catalysis.[2] A peptide with similar functionality was discovered in 2014 by group at Fudan University in Shanghai, China. This peptide also cleaves alpha 1,3 linkages, and has been named PNGase F-II.[3]

References

1. ^{{cite journal | vauthors = Altmann F, Paschinger K, Dalik T, Vorauer K | title = Characterisation of peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A and its N-glycans | journal = European Journal of Biochemistry / FEBS | volume = 252 | issue = 1 | pages = 118–23 | date = Feb 1998 | pmid = 9523720 | doi = 10.1046/j.1432-1327.1998.2520118.x }}
2. ^{{cite journal | vauthors = Allen MD, Buchberger A, Bycroft M | title = The PUB domain functions as a p97 binding module in human peptide N-glycanase | journal = The Journal of Biological Chemistry | volume = 281 | issue = 35 | pages = 25502–8 | date = Sep 2006 | pmid = 16807242 | doi = 10.1074/jbc.M601173200 | url = http://www.jbc.org/content/281/35/25502}}
3. ^{{cite journal | vauthors = Sun G, Yu X, Bao C, Wang L, Li M, Gan J, Qu D, Ma J, Chen L | title = Identification and characterization of a novel prokaryotic peptide: N-glycosidase from Elizabethkingia meningoseptica | journal = The Journal of Biological Chemistry | volume = 290 | issue = 12 | pages = 7452–62 | date = Mar 2015 | pmid = 25614628 | doi = 10.1074/jbc.M114.605493 | url = http://www.jbc.org/content/290/12/7452 | pmc=4367255}}

Further reading

{{refbegin|33em}}
  • {{cite journal | vauthors = Plummer TH, Tarentino AL | title = Facile cleavage of complex oligosaccharides from glycopeptides by almond emulsin peptide: N-glycosidase | journal = The Journal of Biological Chemistry | volume = 256 | issue = 20 | pages = 10243–6 | date = Oct 1981 | pmid = 7287707 }}
  • {{cite journal | vauthors = Takahashi N | title = Demonstration of a new amidase acting on glycopeptides | journal = Biochemical and Biophysical Research Communications | volume = 76 | issue = 4 | pages = 1194–201 | date = Jun 1977 | pmid = 901470 | doi = 10.1016/0006-291X(77)90982-2 }}
  • {{cite journal | vauthors = Takahashi N, Nishibe H | title = Some characteristics of a new glycopeptidase acting on aspartylglycosylamine linkages | journal = Journal of Biochemistry | volume = 84 | issue = 6 | pages = 1467–73 | date = Dec 1978 | pmid = 738997 | doi=10.1093/oxfordjournals.jbchem.a132270}}
  • {{cite journal | vauthors = Tarentino AL, Gómez CM, Plummer TH | title = Deglycosylation of asparagine-linked glycans by peptide:N-glycosidase F | journal = Biochemistry | volume = 24 | issue = 17 | pages = 4665–71 | date = Aug 1985 | pmid = 4063349 | doi = 10.1021/bi00338a028 }}
{{refend}}{{Carbon-nitrogen non-peptide hydrolases}}{{Enzymes}}{{Portal bar|Molecular and Cellular Biology|border=no}}{{3.5-enzyme-stub}}

2 : EC 3.5.1|Enzymes of known structure

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