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词条 Phosphoinositide-dependent kinase-1
释义

  1. Function

  2. Etymology

  3. Structure

  4. Interactions

  5. References

  6. Further reading

  7. External links

{{distinguish|text=Pyruvate dehydrogenase lipoamide kinase isozyme 1 (PDK1)}}{{Infobox_gene}}

In the field of biochemistry, PDPK1 refers to the protein 3-phosphoinositide-dependent protein kinase-1, an enzyme which is encoded by the PDPK1 gene in humans.[1] It is implicated in the development and progression of melanomas.[2]

Function

PDPK1 is a master kinase, which is crucial for the activation of AKT/PKB and many other AGC kinases including PKC, S6K, SGK. An important role for PDPK1 is in the signalling pathways activated by several growth factors and hormones including insulin signaling.

Mice lacking PDPK1 die during early embryonic development, indicating that this enzyme is critical for transmitting the growth-promoting signals necessary for normal mammalian development.

Mice that are deficient in PDPK1 have a ≈40% decrease in body mass, mild glucose intolerance, and are resistant to cancer brought about by hyperactivation of the PI3K pathway (PTEN+/-).[3]

[4]

Etymology

PDPK1 stands for 3-phosphoinositide-dependent protein kinase 1. PDPK1 functions downstream of PI3K through PDPK1's interaction with membrane phospholipids including phosphatidylinositols, phosphatidylinositol (3,4)-bisphosphate and phosphatidylinositol (3,4,5)-trisphosphate. PI3K indirectly regulates PDPK1 by phosphorylating phosphatidylinositols which in turn generates phosphatidylinositol (3,4)-bisphosphate and phosphatidylinositol (3,4,5)-trisphosphate. However, PDPK1 is believed to be constitutively active and does not always require phosphatidylinositols for its activities.

Phosphatidylinositols are only required for the activation at the membrane of some substrates including AKT. PDPK1 however does not require membrane lipid binding for the efficient phosphorylation of most of its substrates in the cytosol (not at the cell membrane).

Structure

The structure of PDPK1 can be divided into two domains; the kinase or catalytic domain and the PH domain. The PH domain functions mainly in the interaction of PDPK1 with phosphatidylinositol (3,4)-bisphosphate and phosphatidylinositol (3,4,5)-trisphosphate which is important in localization and activation of some of membrane associated PDPK1's substrates including AKT.

The kinase domain has three ligand binding sites; the substrate binding site, the ATP binding site, and the docking site (also known as PIF pocket). Several PDPK1 substrates including S6K and Protein kinase C, require the binding at this docking site. Small molecule allosteric activators of PDPK1 were shown to selectively inhibit activation of substrates that require docking site interaction. These compounds do not bind to the active site and allow PDPK1 to activate other substrates that do not require docking site interaction. PDPK1 is constitutively active and at present, there is no known inhibitor proteins for PDPK1.

The activation of PDPK1's main effector, AKT, is believed to require a proper orientation of the kinase and PH domains of PDPK1 and AKT at the membrane.

Interactions

Phosphoinositide-dependent kinase-1 has been shown to interact with:

{{div col|colwidth=20em}}
  • AKT1,[5][6]
  • PKN2,[7][8]
  • PRKACA,[7]
  • PRKCD,[8]
  • PRKCI,[8]
  • Protein kinase Mζ,[8][9][14][10]
  • Protein kinase N1,[9]
  • SGK,[11][12]
  • SLC9A3R2,[12] and
  • YWHAH[13]
{{Div col end}}{{Clear}}

References

1. ^{{cite web | title = Entrez Gene: PDPK1| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=5170| accessdate = }}
2. ^{{cite journal | vauthors = Scortegagna M, Ruller C, Feng Y, Lazova R, Kluger H, Li JL, De SK, Rickert R, Pellecchia M, Bosenberg M, Ronai ZA | title = Genetic inactivation or pharmacological inhibition of Pdk1 delays development and inhibits metastasis of Braf(V600E)::Pten(-/-) melanoma | journal = Oncogene | volume = 33 | issue = 34 | pages = 4330–9 | year = 2014 | pmid = 24037523| pmc = 3955742| doi = 10.1038/onc.2013.383 }}
3. ^{{cite journal | vauthors = Mora A, Komander D, van Aalten DM, Alessi DR | title = PDK1, the master regulator of AGC kinase signal transduction | journal = Semin. Cell Dev. Biol. | volume = 15 | issue = 2 | pages = 161–70 | date = April 2004 | pmid = 15209375 | doi = 10.1016/j.semcdb.2003.12.022 }}
4. ^{{cite journal | vauthors = Frödin M, Antal TL, Dümmler BA, Jensen CJ, Deak M, Gammeltoft S, Biondi RM | title = A phosphoserine/threonine-binding pocket in AGC kinases and PDK1 mediates activation by hydrophobic motif phosphorylation | journal = EMBO J. | volume = 21 | issue = 20 | pages = 5396–407 | date = October 2002 | pmid = 12374740 | pmc = 129083 | doi = 10.1093/emboj/cdf551 }}
5. ^{{cite journal | vauthors = Barry FA, Gibbins JM | title = Protein kinase B is regulated in platelets by the collagen receptor glycoprotein VI | journal = J. Biol. Chem. | volume = 277 | issue = 15 | pages = 12874–8 | date = April 2002 | pmid = 11825911 | doi = 10.1074/jbc.M200482200 }}
6. ^{{cite journal | vauthors = Persad S, Attwell S, Gray V, Mawji N, Deng JT, Leung D, Yan J, Sanghera J, Walsh MP, Dedhar S | title = Regulation of protein kinase B/Akt-serine 473 phosphorylation by integrin-linked kinase: critical roles for kinase activity and amino acids arginine 211 and serine 343 | journal = J. Biol. Chem. | volume = 276 | issue = 29 | pages = 27462–9 | date = July 2001 | pmid = 11313365 | doi = 10.1074/jbc.M102940200 }}
7. ^{{cite journal | vauthors = Biondi RM, Cheung PC, Casamayor A, Deak M, Currie RA, Alessi DR | title = Identification of a pocket in the PDK1 kinase domain that interacts with PIF and the C-terminal residues of PKA | journal = EMBO J. | volume = 19 | issue = 5 | pages = 979–88 | date = March 2000 | pmid = 10698939 | pmc = 305637 | doi = 10.1093/emboj/19.5.979 }}
8. ^{{cite journal | vauthors = Hodgkinson CP, Sale GJ | title = Regulation of both PDK1 and the phosphorylation of PKC-zeta and -delta by a C-terminal PRK2 fragment | journal = Biochemistry | volume = 41 | issue = 2 | pages = 561–9 | date = January 2002 | pmid = 11781095 | doi = 10.1021/bi010719z}}
9. ^{{cite journal | vauthors = Balendran A, Biondi RM, Cheung PC, Casamayor A, Deak M, Alessi DR | title = A 3-phosphoinositide-dependent protein kinase-1 (PDK1) docking site is required for the phosphorylation of protein kinase Czeta (PKCzeta ) and PKC-related kinase 2 by PDK1 | journal = J. Biol. Chem. | volume = 275 | issue = 27 | pages = 20806–13 | date = July 2000 | pmid = 10764742 | doi = 10.1074/jbc.M000421200 }}
10. ^{{cite journal | vauthors = Le Good JA, Ziegler WH, Parekh DB, Alessi DR, Cohen P, Parker PJ | title = Protein kinase C isotypes controlled by phosphoinositide 3-kinase through the protein kinase PDK1 | journal = Science | volume = 281 | issue = 5385 | pages = 2042–5 | date = September 1998 | pmid = 9748166 | doi = 10.1126/science.281.5385.2042}}
11. ^{{cite journal | vauthors = Park J, Leong ML, Buse P, Maiyar AC, Firestone GL, Hemmings BA | title = Serum and glucocorticoid-inducible kinase (SGK) is a target of the PI 3-kinase-stimulated signaling pathway | journal = EMBO J. | volume = 18 | issue = 11 | pages = 3024–33 | date = June 1999 | pmid = 10357815 | pmc = 1171384 | doi = 10.1093/emboj/18.11.3024 }}
12. ^{{cite journal | vauthors = Chun J, Kwon T, Lee E, Suh PG, Choi EJ, Sun Kang S | title = The Na(+)/H(+) exchanger regulatory factor 2 mediates phosphorylation of serum- and glucocorticoid-induced protein kinase 1 by 3-phosphoinositide-dependent protein kinase 1 | journal = Biochem. Biophys. Res. Commun. | volume = 298 | issue = 2 | pages = 207–15 | date = October 2002 | pmid = 12387817 | doi = 10.1016/s0006-291x(02)02428-2}}
13. ^{{cite journal | vauthors = Sato S, Fujita N, Tsuruo T | title = Regulation of kinase activity of 3-phosphoinositide-dependent protein kinase-1 by binding to 14-3-3 | journal = J. Biol. Chem. | volume = 277 | issue = 42 | pages = 39360–7 | date = October 2002 | pmid = 12177059 | doi = 10.1074/jbc.M205141200 }}

Further reading

{{refbegin|35em}}
  • {{cite journal | vauthors = Vanhaesebroeck B, Alessi DR | title = The PI3K-PDK1 connection: more than just a road to PKB | journal = Biochem. J. | volume = 346 Pt 3 | issue = 3 | pages = 561–76 | year = 2000 | pmid = 10698680 | pmc = 1220886 | doi = 10.1042/0264-6021:3460561 }}
  • {{cite journal | vauthors = Maruyama K, Sugano S | title = Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides | journal = Gene | volume = 138 | issue = 1–2 | pages = 171–4 | year = 1994 | pmid = 8125298 | doi = 10.1016/0378-1119(94)90802-8 }}
  • {{cite journal | vauthors = Alessi DR, James SR, Downes CP, Holmes AB, Gaffney PR, Reese CB, Cohen P | title = Characterization of a 3-phosphoinositide-dependent protein kinase which phosphorylates and activates protein kinase Balpha | journal = Curr. Biol. | volume = 7 | issue = 4 | pages = 261–9 | year = 1997 | pmid = 9094314 | doi = 10.1016/S0960-9822(06)00122-9 }}
  • {{cite journal | vauthors = Moser BA, Dennis PB, Pullen N, Pearson RB, Williamson NA, Wettenhall RE, Kozma SC, Thomas G | title = Dual requirement for a newly identified phosphorylation site in p70s6k | journal = Mol. Cell. Biol. | volume = 17 | issue = 9 | pages = 5648–55 | year = 1997 | pmid = 9271440 | pmc = 232413 | doi = 10.1128/MCB.17.9.5648}}
  • {{cite journal | vauthors = Alessi DR, Deak M, Casamayor A, Caudwell FB, Morrice N, Norman DG, Gaffney P, Reese CB, MacDougall CN, Harbison D, Ashworth A, Bownes M | title = 3-Phosphoinositide-dependent protein kinase-1 (PDK1): structural and functional homology with the Drosophila DSTPK61 kinase | journal = Curr. Biol. | volume = 7 | issue = 10 | pages = 776–89 | year = 1997 | pmid = 9368760 | doi = 10.1016/S0960-9822(06)00336-8 }}
  • {{cite journal | vauthors = Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, Suyama A, Sugano S | title = Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library | journal = Gene | volume = 200 | issue = 1–2 | pages = 149–56 | year = 1997 | pmid = 9373149 | doi = 10.1016/S0378-1119(97)00411-3 }}
  • {{cite journal | vauthors = Meier R, Alessi DR, Cron P, Andjelković M, Hemmings BA | title = Mitogenic activation, phosphorylation, and nuclear translocation of protein kinase Bbeta | journal = J. Biol. Chem. | volume = 272 | issue = 48 | pages = 30491–7 | year = 1997 | pmid = 9374542 | doi = 10.1074/jbc.272.48.30491 }}
  • {{cite journal | vauthors = Alessi DR, Kozlowski MT, Weng QP, Morrice N, Avruch J | title = 3-Phosphoinositide-dependent protein kinase 1 (PDK1) phosphorylates and activates the p70 S6 kinase in vivo and in vitro | journal = Curr. Biol. | volume = 8 | issue = 2 | pages = 69–81 | year = 1998 | pmid = 9427642 | doi = 10.1016/S0960-9822(98)70037-5 | url = http://www.cell.com/current-biology/pdf/S0960-9822(98)70037-5.pdf }} {{open access}}
  • {{cite journal | vauthors = Dalby KN, Morrice N, Caudwell FB, Avruch J, Cohen P | title = Identification of regulatory phosphorylation sites in mitogen-activated protein kinase (MAPK)-activated protein kinase-1a/p90rsk that are inducible by MAPK | journal = J. Biol. Chem. | volume = 273 | issue = 3 | pages = 1496–505 | year = 1998 | pmid = 9430688 | doi = 10.1074/jbc.273.3.1496 }}
  • {{cite journal | vauthors = Pullen N, Dennis PB, Andjelkovic M, Dufner A, Kozma SC, Hemmings BA, Thomas G | title = Phosphorylation and activation of p70s6k by PDK1 | journal = Science | volume = 279 | issue = 5351 | pages = 707–10 | year = 1998 | pmid = 9445476 | doi = 10.1126/science.279.5351.707 }}
  • {{cite journal | vauthors = Stephens L, Anderson K, Stokoe D, Erdjument-Bromage H, Painter GF, Holmes AB, Gaffney PR, Reese CB, McCormick F, Tempst P, Coadwell J, Hawkins PT | title = Protein kinase B kinases that mediate phosphatidylinositol 3,4,5-trisphosphate-dependent activation of protein kinase B | journal = Science | volume = 279 | issue = 5351 | pages = 710–4 | year = 1998 | pmid = 9445477 | doi = 10.1126/science.279.5351.710 }}
  • {{cite journal | vauthors = Walker KS, Deak M, Paterson A, Hudson K, Cohen P, Alessi DR | title = Activation of protein kinase B beta and gamma isoforms by insulin in vivo and by 3-phosphoinositide-dependent protein kinase-1 in vitro: comparison with protein kinase B alpha | journal = Biochem. J. | volume = 331 ( Pt 1) | issue = 1 | pages = 299–308 | year = 1998 | pmid = 9512493 | pmc = 1219352 | doi = 10.1042/bj3310299}}
  • {{cite journal | vauthors = Anderson KE, Coadwell J, Stephens LR, Hawkins PT | title = Translocation of PDK-1 to the plasma membrane is important in allowing PDK-1 to activate protein kinase B | journal = Curr. Biol. | volume = 8 | issue = 12 | pages = 684–91 | year = 1998 | pmid = 9637919 | doi = 10.1016/S0960-9822(98)70274-X }}
  • {{cite journal | vauthors = Le Good JA, Ziegler WH, Parekh DB, Alessi DR, Cohen P, Parker PJ | title = Protein kinase C isotypes controlled by phosphoinositide 3-kinase through the protein kinase PDK1 | journal = Science | volume = 281 | issue = 5385 | pages = 2042–5 | year = 1998 | pmid = 9748166 | doi = 10.1126/science.281.5385.2042 }}
  • {{cite journal | vauthors = Currie RA, Walker KS, Gray A, Deak M, Casamayor A, Downes CP, Cohen P, Alessi DR, Lucocq J | title = Role of phosphatidylinositol 3,4,5-trisphosphate in regulating the activity and localization of 3-phosphoinositide-dependent protein kinase-1 | journal = Biochem. J. | volume = 337 ( Pt 3) | issue = 3 | pages = 575–83 | year = 1999 | pmid = 9895304 | pmc = 1220012 | doi = 10.1042/0264-6021:3370575 }}
  • {{cite journal | vauthors = Kobayashi T, Cohen P | title = Activation of serum- and glucocorticoid-regulated protein kinase by agonists that activate phosphatidylinositide 3-kinase is mediated by 3-phosphoinositide-dependent protein kinase-1 (PDK1) and PDK2 | journal = Biochem. J. | volume = 339 ( Pt 2) | issue = 2 | pages = 319–28 | year = 1999 | pmid = 10191262 | pmc = 1220160 | doi = 10.1042/0264-6021:3390319 }}
  • {{cite journal | vauthors = Balendran A, Casamayor A, Deak M, Paterson A, Gaffney P, Currie R, Downes CP, Alessi DR | title = PDK1 acquires PDK2 activity in the presence of a synthetic peptide derived from the carboxyl terminus of PRK2 | journal = Curr. Biol. | volume = 9 | issue = 8 | pages = 393–404 | year = 1999 | pmid = 10226025 | doi = 10.1016/S0960-9822(99)80186-9 }}
  • {{cite journal | vauthors = Park J, Leong ML, Buse P, Maiyar AC, Firestone GL, Hemmings BA | title = Serum and glucocorticoid-inducible kinase (SGK) is a target of the PI 3-kinase-stimulated signaling pathway | journal = EMBO J. | volume = 18 | issue = 11 | pages = 3024–33 | year = 1999 | pmid = 10357815 | pmc = 1171384 | doi = 10.1093/emboj/18.11.3024 }}
  • {{cite journal | vauthors = Paradis S, Ailion M, Toker A, Thomas JH, Ruvkun G | title = A PDK1 homolog is necessary and sufficient to transduce AGE-1 PI3 kinase signals that regulate diapause in Caenorhabditis elegans | journal = Genes Dev. | volume = 13 | issue = 11 | pages = 1438–52 | year = 1999 | pmid = 10364160 | pmc = 316759 | doi = 10.1101/gad.13.11.1438 }}
  • {{cite journal | vauthors = Casamayor A, Morrice NA, Alessi DR | title = Phosphorylation of Ser-241 is essential for the activity of 3-phosphoinositide-dependent protein kinase-1: identification of five sites of phosphorylation in vivo | journal = Biochem. J. | volume = 342 ( Pt 2) | issue = 2 | pages = 287–92 | year = 1999 | pmid = 10455013 | pmc = 1220463 | doi = 10.1042/0264-6021:3420287 }}
{{refend}}

External links

  • {{MeshName|3-phosphoinositide-dependent+protein+kinase}}
{{PDB Gallery|geneid=5170}}{{Serine/threonine-specific protein kinases}}{{Enzymes}}{{Portal bar|Molecular and Cellular Biology|border=no}}

2 : Protein kinases|EC 2.7.11

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